- Schlötterer C, Amos B, Tautz D. Conservation of polymorphic simple sequence loci in cetacean species. Nature. 1991 Nov 7;354(6348):63-5. doi: 10.1038/354063a0.
- Imhof M, Schlötterer C. Fitness effects of advantageous mutations in evolving Escherichia coli populations. Proc Natl Acad Sci U S A. 2001 Jan 30;98(3):1113-7. doi: 10.1073/pnas.98.3.1113.
- Harr B, Kauer M, Schlötterer C. Hitchhiking mapping: a population-based fine- mapping strategy for adaptive mutations in Drosophila melanogaster. Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):12949-54. doi: 10.1073/pnas.202336899.
- Torres TT, Metta M, Ottenwälder B, Schlötterer C. Gene expression profiling by massively parallel sequencing. Genome Res. 2008 Jan;18(1):172-7. doi: 10.1101/gr.6984908.
- Nolte V, Pandey RV, Jost S, Medinger R, Ottenwälder B, Boenigk J, Schlötterer C. Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity. Mol Ecol. 2010 Jul;19(14):2908-15. doi: 10.1111/j.1365-294X.2010.04669.x.
- Kofler R, Pandey RV, Schlötterer C. PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq). Bioinformatics. 2011 Dec 15;27(24):3435-6. doi: 10.1093/bioinformatics/btr589.
- Kofler R, Hill T, Nolte V, Betancourt AJ, Schlötterer C. The recent invasion of natural Drosophila simulans populations by the P-element. Proc Natl Acad Sci U S A. 2015 May 26;112(21):6659-63. doi: 10.1073/pnas.1500758112.
- Barghi N, Tobler R, Nolte V, Jakšić AM, Mallard F, Otte KA, Dolezal M, Taus T, Kofler R, Schlötterer C. Genetic redundancy fuels polygenic adaptation in Drosophila. PLoS Biol. 2019 Feb 4;17(2):e3000128. doi: 10.1371/journal.pbio.3000128. PMID: 30716062; PMCID: PMC6375663.
- Jakšić AM, Karner J, Nolte V, Hsu SK, Barghi N, Mallard F, Otte KA, Svečnjak L, Senti KA, Schlötterer C. Neuronal Function and Dopamine Signaling Evolve at High Temperature in Drosophila. Mol Biol Evol. 2020 Sep 1;37(9):2630-2640. doi: 10.1093/molbev/msaa116.
- Hsu SK, Lai WY, Novak J, Lehner F, Jakšić AM, Versace E, Schlötterer C. Reproductive isolation arises during laboratory adaptation to a novel hot environment. Genome Biol. 2024 May 28;25(1):141. doi: 10.1186/s13059-024-03285-9.
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